Publications

  • Waliman, M*; Johnson, R*; Natesan, G; Tan, S; Santella, A; Hong, R; Shah, P. Automated Cell Lineage Reconstruction using Label-Free 4D Microscopy. Genetics. 2023 228(2) iyae135
  • Natesan, G; Hamilton, T; Deeds, E; Shah, P. Novel metrics reveal new structure and unappreciated heterogeneity in C. elegans development. PLOS Computational Biology. 2023 10.1371/journal.pcbi.1011733
  • Shah, P; Bao, Z; Zaidel-Bar, R. Visualizing and quantifying molecular and cellular processes in C. elegans using light microscopy. Genetics. 2022 Jun iyac068

From Pavak’s postdoc in the Bao Lab at MSKCC:

  • Vorselen, D; Wang, Y; de Jesus, M; Shah, P; Footer, M; Huse, M; Cai, W; Theriot, J. Superresolved microparticle traction force microscopy reveals subcellular force patterns in immune cell-target interactions. bioRxiv: 431221
  • Ghose, P; Rashid, A; Insley, P; Trivedi, M; Shah, P; Singhal, A; Lu, Y; Bao, Z; Shaham, S. EFF-1 fusogen promotes phagosome sealing during cell process clearance in C. elegans. Nature Cell Biology. 20(4): 393-9. 2018 Mar.
  • Shah, P; Santella, A; Jacobo, A; Siletti, K; Hudspeth, JA; Bao, Z. An in toto approach to dissecting cellular interactions in complex tissues. Developmental Cell. 43(4): 530-540.e4. 2017 Nov.
  • Shah, P*; Tanner, M*; Kovacevic, I; Rankin, A; Marshall, T; Noblett, N; Tran, N; Roenspies, T; Hung, J; Chen, Z; Slatculescu, C; Perkins, T; Bao, Z; Colavita, A. PCP and SAX-3/Robo pathways cooperate to regulate convergent extension-based nerve cord assembly in C. elegans. Developmental Cell. 41(2): 194-203. 2017 Apr.
  • Du, Z; Santella, A; He, F; Shah, P; Kamikawa, Y; Bao, Z. The regulatory landscape of differentiation in a metazoan embryo. Developmental Cell. 34(5): 592-607. 2016 Sep.
  • Santella, A; Catena, R; Kovacevic, I; Shah, P; Yu, Z; Marquina-Solis, J; Kumar, A; Wu, Y; Schaff, J; Colón-Ramos, D; Shroff, H; Mohler, W; Bao, Z. WormGUIDES: an interactive single cell developmental atlas and tool for collaborative multidimensional data exploration. BMC Bioinformatics. 16(1): 189. 2015 Jun.

From Pavak’s graduate work in the Allbritton Lab at UNC / NCSU:

  • Shah, P; Walker, M; Sims, C; Major, B; Allbritton N. Dynamics and evolution of β-catenin dependent Wnt signaling revealed through massively parallel clonogenic screening. Integrative Biology. 6: 673-84. 2014 May
  • Shah, P; Herrera-Loeza, S; Sims, C; Yeh, J; Allbritton, N. Small sample sorting of primary adherent cells by automated micropallet imaging and release. Cytometry: Part A. 85(7): 642-9. 2014 Jul.
  • Shah, P; Hughes, M; Wang, Y; Sims, C; Allbritton, N. Scalable synthesis of a biocompatible, transparent and superparamagnetic photoresist for microdevice fabrication. Journal of Micromechanics and Microengineering. 23(10):107002. 2013 Sep.
  • Wang, Y; Ahmad, A; Shah, P; Sims, C; Magness, S; Allbritton, N. Capture and 3D culture of colonic crypts and colonoids in a microarray platform. Lab on a Chip 13(23): 4991-7. 2013 Sep.
  • Kovarik, M; Shah, P; Armistead, P; Allbritton, N. Microfluidic Chemical Cytometry of Peptide Degradation in Single Drug-Treated Acute Myeloid Leukemia Cells. Analytical Chemistry. 85(10): 4991-4997. 2013 Apr.
  • Kovarik, M; Ornoff, D; Melvin, A; Dobes, N; Wang, Y; Dickinson, A; Gach, P; Shah, P; Allbritton, N. Micro Total Analysis Systems: Fundamental Advances and Applications in the Laboratory, Clinic, and Field. Analytical Chemistry. 85(2): 451-472. 2012 Nov.
  • Wang, Y; Shah, P; Phillips, C; Sims, C; Allbriton, N. Trapping cells on a stretchable microwell array for single-cell analysis. Analytical and Bioanalytical Chemistry, 402(3): 1065-1072. 2012 Jan.

* Equal contribution

 

Full list of publications on Google Scholar
Pavak’s profile on ORCID