Amjad Askary*
Publications:
Hao K, Barrett M, Samadi Z, Zarezadeh A, McGrath Y, Askary A. Reconstructing signaling history of single cells with imaging-based molecular recording. bioRxiv. 2024 Oct 12. view on PubMed
Samadi Z, Askary A. Spatial motifs reveal patterns in cellular architecture of complex tissues. bioRxiv. 2024 Apr 11. view on PubMed
Tran M, Askary A, Elowitz MB. Lineage motifs as developmental modules for control of cell type proportions. Dev Cell. 2024 Mar 25; 59(6):812-826.e3. view on PubMed
Tran M, Askary A, Elowitz MB. Lineage motifs: developmental modules for control of cell type proportions. bioRxiv. 2023 Jun 07. view on PubMed
Perens EA, Diaz JT, Quesnel A, Askary A, Crump JG, Yelon D. osr1 couples intermediate mesoderm cell fate with temporal dynamics of vessel progenitor cell differentiation. Development. 2021 08 01; 148(15). view on PubMed
Askary A, Sanchez-Guardado L, Linton JM, Chadly DM, Budde MW, Cai L, Lois C, Elowitz MB. Publisher Correction: In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription. Nat Biotechnol. 2020 Feb; 38(2):245. view on PubMed
Askary A, Sanchez-Guardado L, Linton JM, Chadly DM, Budde MW, Cai L, Lois C, Elowitz MB. In situ readout of DNA barcodes and single base edits facilitated by in vitro transcription. Nat Biotechnol. 2020 01; 38(1):66-75. view on PubMed
Askary A, Xu P, Barske L, Bay M, Bump P, Balczerski B, Bonaguidi MA, Crump JG. Genome-wide analysis of facial skeletal regionalization in zebrafish. Development. 2017 08 15; 144(16):2994-3005. view on PubMed
Smeeton J, Askary A, Crump JG. Building and maintaining joints by exquisite local control of cell fate. Wiley Interdiscip Rev Dev Biol. 2017 01; 6(1). view on PubMed
Askary A, Smeeton J, Paul S, Schindler S, Braasch I, Ellis NA, Postlethwait J, Miller CT, Crump JG. Ancient origin of lubricated joints in bony vertebrates. Elife. 2016 07 19; 5. view on PubMed
Barske L, Askary A, Zuniga E, Balczerski B, Bump P, Nichols JT, Crump JG. Competition between Jagged-Notch and Endothelin1 Signaling Selectively Restricts Cartilage Formation in the Zebrafish Upper Face. PLoS Genet. 2016 Apr; 12(4):e1005967. view on PubMed
Askary A, Mork L, Paul S, He X, Izuhara AK, Gopalakrishnan S, Ichida JK, McMahon AP, Dabizljevic S, Dale R, Mariani FV, Crump JG. Iroquois Proteins Promote Skeletal Joint Formation by Maintaining Chondrocytes in an Immature State. Dev Cell. 2015 Nov 09; 35(3):358-65. view on PubMed
Askary A, Shimazaki N, Bayat N, Lieber MR. Modeling of the RAG reaction mechanism. Cell Rep. 2014 Apr 24; 7(2):307-315. view on PubMed
Shimazaki N, Askary A, Swanson PC, Lieber MR. Mechanistic basis for RAG discrimination between recombination sites and the off-target sites of human lymphomas. Mol Cell Biol. 2012 Jan; 32(2):365-75. view on PubMed
Askary A, Masoudi-Nejad A, Sharafi R, Mizbani A, Parizi SN, Purmasjedi M. N4: a precise and highly sensitive promoter predictor using neural network fed by nearest neighbors. Genes Genet Syst. 2009 Dec; 84(6):425-30. view on PubMed
